README for Figure 2c.zip 
*** This file contains the predicted structure represented in Figure 2c of 
Article: Identification, characterization and classification of Nucleoid-Associated Proteins
Authors: Samuel Schwab, Remus T. Dame
Journal: Molecular Microbiology
Corresponding author: rtdame@chem.leidenuniv.nl

Legend Figure 2c:
The homodimer of Sul12a from Sulfolobus acidocaldarius as predicted by AlphaFold2. The DNA, the DNA binding domain, and the dimerization domain are colored blue, green, and orange, respectively. The DNA was placed by superimposing the DNA-binding domain of the DNA co-crystal structure of IdeR from Saccharopolyspora erythraea (PDB: 7B1Y) (Marcos-Torres et al., 2021).

 *** The data were obtained by generating multiple sequence alignments with MMseqs2, which were subsequently used as inputs for LocalColabFold to predict the protein structures with AlphaFold2 and AlphaFold2-Multimer. The multiple sequence alignments, the predicted aligned errors, the predicted local distance difference tests, and the structure files in PDB format are provided.